Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pfdn5Q9WU28 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Gm7638-201ENSMUST00000121348 967 ntBASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pfdn5Q9WU28 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pfdn5Q9WU28 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pfdn5Q9WU28 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.82□□□□□ -0.36
Pfdn5Q9WU28 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pfdn5Q9WU28 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pfdn5Q9WU28 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms