Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Chaf1aQ9QWF0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chaf1aQ9QWF0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Gm44430-201ENSMUST00000203376 995 ntBASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chaf1aQ9QWF0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chaf1aQ9QWF0 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chaf1aQ9QWF0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms