Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 AC153881.2-201ENSMUST00000214877 204 ntBASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Rbfox1Q9JJ43 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm15565-201ENSMUST00000118890 427 ntBASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm5587-201ENSMUST00000206270 674 ntBASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rbfox1Q9JJ43 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Gm45328-201ENSMUST00000210942 917 ntBASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rbfox1Q9JJ43 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rbfox1Q9JJ43 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rbfox1Q9JJ43 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.3□□□□□ -0.28
Rbfox1Q9JJ43 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rbfox1Q9JJ43 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms