Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Smco4Q9JIS3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Efs-202ENSMUST00000227037 2540 ntBASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Smco4Q9JIS3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Smco4Q9JIS3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Smco4Q9JIS3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Smco4Q9JIS3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Smco4Q9JIS3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Smco4Q9JIS3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms