Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccl28Q9JIL2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl28Q9JIL2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Gm9013-201ENSMUST00000132939 882 ntBASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl28Q9JIL2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl28Q9JIL2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl28Q9JIL2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms