Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Sh2d4aQ9D7V1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sh2d4aQ9D7V1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Mir5130-201ENSMUST00000175160 84 ntBASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sh2d4aQ9D7V1 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Gm45058-201ENSMUST00000205810 766 ntBASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Sh2d4aQ9D7V1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.15■□□□□ 0.02
Sh2d4aQ9D7V1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms