Protein–RNA interactions for Protein: Q9D6F9

Tubb4a, Tubulin beta-4A chain, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb4aQ9D6F9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.92■□□□□ 0.3
Tubb4aQ9D6F9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubb4aQ9D6F9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubb4aQ9D6F9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Gm15378-201ENSMUST00000121894 207 ntBASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.91■□□□□ 0.3
Tubb4aQ9D6F9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubb4aQ9D6F9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.89■□□□□ 0.3
Tubb4aQ9D6F9 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubb4aQ9D6F9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Tubb4aQ9D6F9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Gm10653-202ENSMUST00000139570 835 ntBASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Gm20760-201ENSMUST00000179197 648 ntBASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Tubb4aQ9D6F9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Tubb4aQ9D6F9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb4aQ9D6F9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb4aQ9D6F9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Tubb4aQ9D6F9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Tubb4aQ9D6F9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms