Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Gm15372-201ENSMUST00000120729 834 ntBASIC17.17■□□□□ 0.34
Cfap53Q9D439 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Gm18669-201ENSMUST00000216049 778 ntBASIC17.17■□□□□ 0.34
Cfap53Q9D439 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cfap53Q9D439 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Prob1-201ENSMUST00000097619 3021 ntBASIC17.16■□□□□ 0.34
Cfap53Q9D439 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gm12895-201ENSMUST00000122214 226 ntBASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gm27867-201ENSMUST00000184778 125 ntBASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cfap53Q9D439 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Gm25745-201ENSMUST00000174945 133 ntBASIC17.15■□□□□ 0.34
Cfap53Q9D439 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cfap53Q9D439 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.14■□□□□ 0.33
Cfap53Q9D439 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cfap53Q9D439 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.13■□□□□ 0.33
Cfap53Q9D439 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms