Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Gm7213-201ENSMUST00000215977 950 ntBASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.74□□□□□ -0.05
Chaf1bQ9D0N7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Mir5122-201ENSMUST00000175004 89 ntBASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.73□□□□□ -0.05
Chaf1bQ9D0N7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chaf1bQ9D0N7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.71□□□□□ -0.05
Chaf1bQ9D0N7 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Chaf1bQ9D0N7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chaf1bQ9D0N7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Chaf1bQ9D0N7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms