Protein–RNA interactions for Protein: Q9CZN4

Shisa9, Protein shisa-9, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa9Q9CZN4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.21□□□□□ -0.45
Shisa9Q9CZN4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa9Q9CZN4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm7862-201ENSMUST00000121461 292 ntBASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm7461-201ENSMUST00000058918 827 ntBASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa9Q9CZN4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa9Q9CZN4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms