Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ssr1Q9CY50 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Mir770-201ENSMUST00000103252 94 ntBASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Gm18032-201ENSMUST00000222541 538 ntBASIC16.98■□□□□ 0.31
Ssr1Q9CY50 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ssr1Q9CY50 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.97■□□□□ 0.31
Ssr1Q9CY50 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Gm10013-201ENSMUST00000106074 672 ntBASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssr1Q9CY50 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Gm6623-201ENSMUST00000173570 544 ntBASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.96■□□□□ 0.31
Ssr1Q9CY50 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssr1Q9CY50 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssr1Q9CY50 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssr1Q9CY50 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.96■□□□□ 0.3
Ssr1Q9CY50 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssr1Q9CY50 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssr1Q9CY50 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssr1Q9CY50 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Ssr1Q9CY50 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssr1Q9CY50 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms