Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Gm8655-201ENSMUST00000221159 852 ntBASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retreg3Q9CQV4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm23958-201ENSMUST00000157207 105 ntBASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm6296-201ENSMUST00000222599 943 ntBASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retreg3Q9CQV4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm11780-201ENSMUST00000136880 516 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm5244-202ENSMUST00000189517 743 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm37720-201ENSMUST00000195497 1241 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retreg3Q9CQV4 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Retreg3Q9CQV4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Retreg3Q9CQV4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Retreg3Q9CQV4 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retreg3Q9CQV4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms