Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Col25a1Q99MQ5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Col25a1Q99MQ5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col25a1Q99MQ5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Col25a1Q99MQ5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Col25a1Q99MQ5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Col25a1Q99MQ5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Gm15824-201ENSMUST00000119516 955 ntBASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Gm6745-201ENSMUST00000199216 526 ntBASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Col25a1Q99MQ5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Col25a1Q99MQ5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Gm38294-201ENSMUST00000192831 381 ntBASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Gm6266-201ENSMUST00000203844 806 ntBASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Col25a1Q99MQ5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms