Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf111Q99ML9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf111Q99ML9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf111Q99ML9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf111Q99ML9 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.16■□□□□ 0.02
Rnf111Q99ML9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms