Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm8825-201ENSMUST00000182565 998 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm4518-201ENSMUST00000182638 718 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.16■□□□□ 0.18
SncaipQ99ME3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SncaipQ99ME3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.15■□□□□ 0.18
SncaipQ99ME3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Gm34391-201ENSMUST00000203706 907 ntBASIC16.15■□□□□ 0.18
SncaipQ99ME3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Birc2-201ENSMUST00000054878 378 ntBASIC16.15■□□□□ 0.18
SncaipQ99ME3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SncaipQ99ME3 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SncaipQ99ME3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.14■□□□□ 0.18
SncaipQ99ME3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.14■□□□□ 0.17
SncaipQ99ME3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SncaipQ99ME3 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SncaipQ99ME3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms