Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Gm11424-201ENSMUST00000121929 829 ntBASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx6-1Q99MA9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Gm23547-201ENSMUST00000158210 271 ntBASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx6-1Q99MA9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx6-1Q99MA9 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Nkx6-1Q99MA9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.58□□□□□ -0.08
Nkx6-1Q99MA9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms