Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.69□□□□□ -0.22
Scrt1Q99M85 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scrt1Q99M85 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scrt1Q99M85 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Mir8117-201ENSMUST00000184773 107 ntBASIC13.67□□□□□ -0.22
Scrt1Q99M85 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.67□□□□□ -0.22
Scrt1Q99M85 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.67□□□□□ -0.22
Scrt1Q99M85 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.67□□□□□ -0.22
Scrt1Q99M85 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scrt1Q99M85 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Gm5682-201ENSMUST00000173402 505 ntBASIC13.66□□□□□ -0.22
Scrt1Q99M85 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.66□□□□□ -0.22
Scrt1Q99M85 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.66□□□□□ -0.22
Scrt1Q99M85 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.66□□□□□ -0.22
Scrt1Q99M85 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.66□□□□□ -0.22
Scrt1Q99M85 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scrt1Q99M85 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scrt1Q99M85 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms