Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Gm8318-201ENSMUST00000182954 872 ntBASIC16.44■□□□□ 0.22
Clp1Q99LI9 Gm27622-201ENSMUST00000183779 60 ntBASIC16.44■□□□□ 0.22
Clp1Q99LI9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.44■□□□□ 0.22
Clp1Q99LI9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clp1Q99LI9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.43■□□□□ 0.22
Clp1Q99LI9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.43■□□□□ 0.22
Clp1Q99LI9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.43■□□□□ 0.22
Clp1Q99LI9 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Clp1Q99LI9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.42■□□□□ 0.22
Clp1Q99LI9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Gm24158-201ENSMUST00000175263 71 ntBASIC16.42■□□□□ 0.22
Clp1Q99LI9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clp1Q99LI9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.42■□□□□ 0.22
Clp1Q99LI9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clp1Q99LI9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Gm14722-201ENSMUST00000118943 689 ntBASIC16.41■□□□□ 0.22
Clp1Q99LI9 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.41■□□□□ 0.22
Clp1Q99LI9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.41■□□□□ 0.22
Clp1Q99LI9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.41■□□□□ 0.22
Clp1Q99LI9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Clp1Q99LI9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clp1Q99LI9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms