Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm15358-201ENSMUST00000119249 520 ntBASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Gm27301-201ENSMUST00000184012 127 ntBASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cstf1Q99LC2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cstf1Q99LC2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Gm45612-201ENSMUST00000211320 160 ntBASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Cstf1Q99LC2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm11745-201ENSMUST00000121669 448 ntBASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm45747-201ENSMUST00000212203 999 ntBASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.57■□□□□ 0.08
Cstf1Q99LC2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.56■□□□□ 0.08
Cstf1Q99LC2 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cstf1Q99LC2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms