Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rfc4Q99J62 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.97■□□□□ 0.47
Rfc4Q99J62 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rfc4Q99J62 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Grk6-207ENSMUST00000225925 2769 ntBASIC17.96■□□□□ 0.47
Rfc4Q99J62 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.96■□□□□ 0.47
Rfc4Q99J62 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rfc4Q99J62 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfc4Q99J62 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rfc4Q99J62 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rfc4Q99J62 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.95■□□□□ 0.46
Rfc4Q99J62 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.95■□□□□ 0.46
Rfc4Q99J62 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.95■□□□□ 0.46
Rfc4Q99J62 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rfc4Q99J62 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.94■□□□□ 0.46
Rfc4Q99J62 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfc4Q99J62 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms