Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.42■□□□□ 0.54
Col20a1Q923P0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col20a1Q923P0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.41■□□□□ 0.54
Col20a1Q923P0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Gm8318-201ENSMUST00000182954 872 ntBASIC18.41■□□□□ 0.54
Col20a1Q923P0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.41■□□□□ 0.54
Col20a1Q923P0 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.41■□□□□ 0.54
Col20a1Q923P0 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.41■□□□□ 0.54
Col20a1Q923P0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col20a1Q923P0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 Gm13597-201ENSMUST00000121239 375 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 Gm14822-201ENSMUST00000122247 291 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Gm43575-201ENSMUST00000196420 516 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col20a1Q923P0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.4■□□□□ 0.54
Col20a1Q923P0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Col20a1Q923P0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.39■□□□□ 0.53
Col20a1Q923P0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.39■□□□□ 0.53
Col20a1Q923P0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col20a1Q923P0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.38■□□□□ 0.53
Col20a1Q923P0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col20a1Q923P0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms