Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdha2Q91Y17 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Gm18489-201ENSMUST00000172565 551 ntBASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha2Q91Y17 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Gm8318-201ENSMUST00000182954 872 ntBASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Gm27628-201ENSMUST00000184911 107 ntBASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha2Q91Y17 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Gm9682-201ENSMUST00000197505 556 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha2Q91Y17 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms