Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdha9Q91Y11 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Gm13884-201ENSMUST00000118103 829 ntBASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha9Q91Y11 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Gm27741-201ENSMUST00000185060 237 ntBASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha9Q91Y11 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha9Q91Y11 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha9Q91Y11 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdha9Q91Y11 Gm7230-201ENSMUST00000173026 815 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms