Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.48□□□□□ -0.25
Tram1Q91V04 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Tram1Q91V04 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tram1Q91V04 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Gm5643-201ENSMUST00000117081 966 ntBASIC13.47□□□□□ -0.25
Tram1Q91V04 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tram1Q91V04 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tram1Q91V04 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.46□□□□□ -0.25
Tram1Q91V04 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.46□□□□□ -0.25
Tram1Q91V04 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.46□□□□□ -0.25
Tram1Q91V04 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.46□□□□□ -0.25
Tram1Q91V04 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.46□□□□□ -0.25
Tram1Q91V04 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Tram1Q91V04 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.46□□□□□ -0.25
Tram1Q91V04 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tram1Q91V04 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tram1Q91V04 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tram1Q91V04 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Tram1Q91V04 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Tram1Q91V04 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Tram1Q91V04 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.45□□□□□ -0.26
Tram1Q91V04 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.45□□□□□ -0.26
Tram1Q91V04 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Tram1Q91V04 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.45□□□□□ -0.26
Tram1Q91V04 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Tram1Q91V04 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.44□□□□□ -0.26
Tram1Q91V04 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms