Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm24245-201ENSMUST00000157318 57 ntBASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TraipQ8VIG6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TraipQ8VIG6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TraipQ8VIG6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.58■□□□□ 0.25
TraipQ8VIG6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TraipQ8VIG6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TraipQ8VIG6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.58■□□□□ 0.24
TraipQ8VIG6 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.58■□□□□ 0.24
TraipQ8VIG6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.58■□□□□ 0.24
TraipQ8VIG6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.58■□□□□ 0.24
TraipQ8VIG6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TraipQ8VIG6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.57■□□□□ 0.24
TraipQ8VIG6 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.57■□□□□ 0.24
TraipQ8VIG6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.56■□□□□ 0.24
TraipQ8VIG6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TraipQ8VIG6 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TraipQ8VIG6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms