Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.02□□□□□ -0.16
Odf4Q8VI88 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.02□□□□□ -0.16
Odf4Q8VI88 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Odf4Q8VI88 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.02□□□□□ -0.17
Odf4Q8VI88 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Gm18115-201ENSMUST00000221209 621 ntBASIC14.02□□□□□ -0.17
Odf4Q8VI88 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.02□□□□□ -0.17
Odf4Q8VI88 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.02□□□□□ -0.17
Odf4Q8VI88 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Odf4Q8VI88 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Odf4Q8VI88 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Odf4Q8VI88 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Odf4Q8VI88 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14□□□□□ -0.17
Odf4Q8VI88 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14□□□□□ -0.17
Odf4Q8VI88 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Odf4Q8VI88 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Odf4Q8VI88 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Odf4Q8VI88 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Odf4Q8VI88 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14□□□□□ -0.17
Odf4Q8VI88 AC124569.2-201ENSMUST00000225998 818 ntBASIC14□□□□□ -0.17
Odf4Q8VI88 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Odf4Q8VI88 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14□□□□□ -0.17
Odf4Q8VI88 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Odf4Q8VI88 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Odf4Q8VI88 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms