Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm23243-201ENSMUST00000180047 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24659-201ENSMUST00000180212 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm24169-201ENSMUST00000180244 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm23689-201ENSMUST00000180354 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm27359-201ENSMUST00000184153 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm27785-201ENSMUST00000184268 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm27466-201ENSMUST00000184396 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm27703-201ENSMUST00000184836 110 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Gm44855-201ENSMUST00000205725 362 ntBASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg4Q8VHY0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cspg4Q8VHY0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm5779-201ENSMUST00000218467 910 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm14928-201ENSMUST00000120198 477 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm27618-201ENSMUST00000183671 60 ntBASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.38□□□□□ -0.27
Cspg4Q8VHY0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg4Q8VHY0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms