Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cdhr1Q8VHP6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cdhr1Q8VHP6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cdhr1Q8VHP6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Gm19164-201ENSMUST00000210667 640 ntBASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cdhr1Q8VHP6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Gm6736-201ENSMUST00000166583 948 ntBASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cdhr1Q8VHP6 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr1Q8VHP6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cdhr1Q8VHP6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr1Q8VHP6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cdhr1Q8VHP6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms