Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkd2Q8VE28 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.25□□□□□ -0.13
Nkd2Q8VE28 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Gm7862-201ENSMUST00000121461 292 ntBASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkd2Q8VE28 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gm37935-201ENSMUST00000192012 982 ntBASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkd2Q8VE28 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nkd2Q8VE28 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms