Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Dnajc28Q8VCE1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Dnajc28Q8VCE1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Gm18622-201ENSMUST00000219361 595 ntBASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Dnajc28Q8VCE1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Mir6404-201ENSMUST00000183699 94 ntBASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Dnajc28Q8VCE1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Dnajc28Q8VCE1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms