Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf8Q8VC56 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Gm7284-201ENSMUST00000131667 944 ntBASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf8Q8VC56 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Sybu-209ENSMUST00000228639 4113 ntBASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf8Q8VC56 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf8Q8VC56 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.08■□□□□ 0
Rnf8Q8VC56 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Rnf8Q8VC56 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.08■□□□□ 0
Rnf8Q8VC56 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.08■□□□□ 0
Rnf8Q8VC56 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf8Q8VC56 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Rnf8Q8VC56 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms