Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup35Q8R4R6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup35Q8R4R6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm26039-201ENSMUST00000158152 144 ntBASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm6257-201ENSMUST00000163864 910 ntBASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup35Q8R4R6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup35Q8R4R6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.75□□□□□ -0.37
Nup35Q8R4R6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms