Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna3Q8R4G9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Chrna3Q8R4G9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gm6443-201ENSMUST00000203599 874 ntBASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Chrna3Q8R4G9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.33■□□□□ 0.05
Chrna3Q8R4G9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chrna3Q8R4G9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 AV026068-213ENSMUST00000223675 1171 ntBASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.32■□□□□ 0.04
Chrna3Q8R4G9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms