Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup85Q8R480 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nup85Q8R480 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm18195-201ENSMUST00000207604 706 ntBASIC16.05■□□□□ 0.16
Nup85Q8R480 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.05■□□□□ 0.16
Nup85Q8R480 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nup85Q8R480 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.04■□□□□ 0.16
Nup85Q8R480 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.04■□□□□ 0.16
Nup85Q8R480 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.04■□□□□ 0.16
Nup85Q8R480 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Nup85Q8R480 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Nup85Q8R480 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nup85Q8R480 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.03■□□□□ 0.16
Nup85Q8R480 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.03■□□□□ 0.16
Nup85Q8R480 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Nup85Q8R480 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.03■□□□□ 0.16
Nup85Q8R480 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.03■□□□□ 0.16
Nup85Q8R480 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Nup85Q8R480 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.02■□□□□ 0.16
Nup85Q8R480 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Nup85Q8R480 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
Nup85Q8R480 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.02■□□□□ 0.16
Nup85Q8R480 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Nup85Q8R480 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.02■□□□□ 0.16
Nup85Q8R480 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms