Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Gm27702-201ENSMUST00000184512 56 ntBASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Atp2a1Q8R429 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Mir8117-201ENSMUST00000184773 107 ntBASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Gm45167-201ENSMUST00000208007 322 ntBASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Gm19164-201ENSMUST00000210667 640 ntBASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Atp2a1Q8R429 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Dancr-204ENSMUST00000132389 2347 ntBASIC17.43■□□□□ 0.38
Atp2a1Q8R429 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Gm6736-201ENSMUST00000166583 948 ntBASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Atp2a1Q8R429 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Gm4899-201ENSMUST00000178708 719 ntBASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.42■□□□□ 0.38
Atp2a1Q8R429 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Atp2a1Q8R429 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms