Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc58Q8R3Q6 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc58Q8R3Q6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gm715-201ENSMUST00000117865 831 ntBASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc58Q8R3Q6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Gm13474-201ENSMUST00000122466 815 ntBASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc58Q8R3Q6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms