Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.84■□□□□ 0.13
Slf1Q8R3P9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Slf1Q8R3P9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Slf1Q8R3P9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.83■□□□□ 0.13
Slf1Q8R3P9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.83■□□□□ 0.13
Slf1Q8R3P9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Slf1Q8R3P9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Slf1Q8R3P9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Slf1Q8R3P9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms