Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cgref1Q8R1U2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cgref1Q8R1U2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cgref1Q8R1U2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cgref1Q8R1U2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Actl10-202ENSMUST00000226583 1501 ntBASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Gm10698-201ENSMUST00000182663 604 ntBASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cgref1Q8R1U2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Gm12134-201ENSMUST00000122109 520 ntBASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.94■□□□□ 0.14
Cgref1Q8R1U2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gm7791-201ENSMUST00000219066 539 ntBASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cgref1Q8R1U2 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Gm12527-201ENSMUST00000117967 564 ntBASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cgref1Q8R1U2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms