Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp7Q8R1T1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp7Q8R1T1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp7Q8R1T1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gm13365-201ENSMUST00000121188 973 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gm8318-201ENSMUST00000182954 872 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gm44872-201ENSMUST00000207864 420 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp7Q8R1T1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Chmp7Q8R1T1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chmp7Q8R1T1 Gm11745-201ENSMUST00000121669 448 ntBASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Chmp7Q8R1T1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm12008-201ENSMUST00000117791 755 ntBASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm44335-201ENSMUST00000196879 141 ntBASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm44297-201ENSMUST00000198304 141 ntBASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm44346-201ENSMUST00000198851 141 ntBASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Chmp7Q8R1T1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms