Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Gm7729-201ENSMUST00000050143 801 ntBASIC14.56□□□□□ -0.08
H2afjQ8R1M2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
H2afjQ8R1M2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
H2afjQ8R1M2 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.54□□□□□ -0.08
H2afjQ8R1M2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
H2afjQ8R1M2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.53□□□□□ -0.08
H2afjQ8R1M2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Gm9013-201ENSMUST00000132939 882 ntBASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
H2afjQ8R1M2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms