Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim2Q8R1G6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Matn2-206ENSMUST00000228570 2798 ntBASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.96■□□□□ 0.47
Pdlim2Q8R1G6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim2Q8R1G6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim2Q8R1G6 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim2Q8R1G6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.96■□□□□ 0.46
Pdlim2Q8R1G6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim2Q8R1G6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Gm7791-201ENSMUST00000219066 539 ntBASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pdlim2Q8R1G6 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim2Q8R1G6 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms