Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp40Q8R1F9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpp40Q8R1F9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rpp40Q8R1F9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rpp40Q8R1F9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Gm6443-201ENSMUST00000203599 874 ntBASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Gm18206-201ENSMUST00000207027 926 ntBASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Gm45167-201ENSMUST00000208007 322 ntBASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp40Q8R1F9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Prob1-201ENSMUST00000097619 3021 ntBASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rpp40Q8R1F9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rpp40Q8R1F9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms