Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15163-201ENSMUST00000120749 1302 ntBASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Gm7286-201ENSMUST00000182691 1007 ntBASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ddx54Q8K4L0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Gm11543-201ENSMUST00000120758 370 ntBASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Gm9063-201ENSMUST00000223299 582 ntBASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.37■□□□□ 0.85
Ddx54Q8K4L0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ddx54Q8K4L0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Gm3365-201ENSMUST00000216296 1480 ntBASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ddx54Q8K4L0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Gm6912-201ENSMUST00000117218 544 ntBASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ddx54Q8K4L0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Gm5357-201ENSMUST00000212720 1924 ntBASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ddx54Q8K4L0 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms