Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Thap2-203ENSMUST00000218989 527 ntBASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alms1Q8K4E0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Gm15427-201ENSMUST00000117288 531 ntBASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Mir7023-201ENSMUST00000185093 64 ntBASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alms1Q8K4E0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gm9682-201ENSMUST00000197505 556 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Alms1Q8K4E0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Gm11424-201ENSMUST00000121929 829 ntBASIC15.21■□□□□ 0.02
Alms1Q8K4E0 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Alms1Q8K4E0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm18889-201ENSMUST00000174284 929 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm4518-201ENSMUST00000182638 718 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.2■□□□□ 0.02
Alms1Q8K4E0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms