Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm8825-201ENSMUST00000182565 998 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm4518-201ENSMUST00000182638 718 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox30Q8CGW4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox30Q8CGW4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Gm11950-201ENSMUST00000121615 838 ntBASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Gm12134-201ENSMUST00000122109 520 ntBASIC17.06■□□□□ 0.32
Sox30Q8CGW4 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Gm9172-201ENSMUST00000212092 954 ntBASIC17.06■□□□□ 0.32
Sox30Q8CGW4 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sox30Q8CGW4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.05■□□□□ 0.32
Sox30Q8CGW4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox30Q8CGW4 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms