Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Gm5867-201ENSMUST00000063197 592 ntBASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rdh1Q8CGV4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Gm27300-201ENSMUST00000184085 97 ntBASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Gm27335-201ENSMUST00000184758 97 ntBASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Gm2213-201ENSMUST00000197485 688 ntBASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.16■□□□□ 0.02
Rdh1Q8CGV4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rdh1Q8CGV4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rdh1Q8CGV4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms