Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hist3h2bbQ8CGP0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Smad6-203ENSMUST00000179458 273 ntBASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Hist3h2bbQ8CGP0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm13534-201ENSMUST00000121169 513 ntBASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hist3h2bbQ8CGP0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hist3h2bbQ8CGP0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms