Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Gm14026-201ENSMUST00000120625 1789 ntBASIC19.34■□□□□ 0.69
Smc5Q8CG46 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smc5Q8CG46 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc5Q8CG46 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc5Q8CG46 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Smc5Q8CG46 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smc5Q8CG46 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Gm11950-201ENSMUST00000121615 838 ntBASIC19.33■□□□□ 0.68
Smc5Q8CG46 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smc5Q8CG46 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.32■□□□□ 0.68
Smc5Q8CG46 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC19.32■□□□□ 0.68
Smc5Q8CG46 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gm29340-201ENSMUST00000188763 3854 ntBASIC19.31■□□□□ 0.68
Smc5Q8CG46 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gm10231-201ENSMUST00000181584 441 ntBASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Gm10175-202ENSMUST00000208752 441 ntBASIC19.31■□□□□ 0.68
Smc5Q8CG46 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc5Q8CG46 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Gm45328-201ENSMUST00000210942 917 ntBASIC19.3■□□□□ 0.68
Smc5Q8CG46 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC19.3■□□□□ 0.68
Smc5Q8CG46 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms