Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm27704-201ENSMUST00000185094 107 ntBASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb7Q8CDY9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Asic1-205ENSMUST00000228185 1818 ntBASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb7Q8CDY9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Gm33142-201ENSMUST00000193913 867 ntBASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb7Q8CDY9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pcdhb7Q8CDY9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms