Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc38Q8CDN8 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Gm44454-201ENSMUST00000198541 138 ntBASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc38Q8CDN8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ccdc38Q8CDN8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc38Q8CDN8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms